THIS PATCH IS PRELIMINARY AND DOES NOT WORK.
It also needs some major cleanup and most plugins are not yet compiling. Going to need any help I can get here, but I'll be working on it.
-Separated LIRC functions into new lirc.c file so they can be used in gui or nogui build.
-Added pause/continue functionality to LIRC.
-Made it so LIRC commands work while emulation is paused.
-Added wiki page on how to setup LIRC for Mupen64Plus.
-Fixed minor bug with g_EmulationRunning (it was being set to 1 during stopEmulation).
-Added default plugins to mupen64plus.conf file:
-Gfx: ricevideo.so
-Audio: mupen64_audio.so
-Input: blight_input.so
-RSP: mupen64_hle_rsp_azimer.so
These two fixes address the problem of no plugins being selected on first load of mupen64plus.